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Description:
This script allows users who have picked OTUs in QIIME to convert it to a sample mapping (environment) file for use with the Unifrac web interface.
Usage: convert_otu_table_to_unifrac_sample_mapping.py [options]
Input Arguments:
Note
[REQUIRED]
Output:
The result of this script is a sample mapping file for the UniFrac web interface.
Example:
Convert a biom-formatted OTU table to a unifrac sample mapping (environment) file:
convert_otu_table_to_unifrac_sample_mapping.py -i otu_table.biom -o otu_table.sample_mapping.txt