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Description:
This script allows users that have already created sample mapping (environment) files for use with the Unifrac web interface to use QIIME. QIIME records this data in an OTU table.
Usage: convert_unifrac_sample_mapping_to_otu_table.py [options]
Input Arguments:
Note
[REQUIRED]
Output:
The result of this script is an OTU table.
Example:
Convert a UniFrac sample mapping (environment) file into a biom-formatted OTU table:
convert_unifrac_sample_mapping_to_otu_table.py -i otu_table.sample_mapping.txt -o otu_table.biom