print_qiime_config.py – Print and optionally test QIIME configuration details

Description:

Print QIIME configuration details and optionally perform tests of the QIIME base or full install.

Usage: print_qiime_config.py [options]

Input Arguments:

Note

[OPTIONAL]

-t, --test

Test the QIIME install and configuration [default: False]

-b, --qiime_base_install

SUPPRESSHELP

-f, --qiime_full_install

If passed, report on dependencies required for the QIIME full install. To perform tests of the QIIME full install, you must also pass -t. [default: False]

--haiku

SUPPRESSHELP

Output:

Prints QIIME configuration details to standard output.

Example 1:

Print basic QIIME configuration details:

print_qiime_config.py

Example 2:

Print basic QIIME configuration details and test the base QIIME installation:

print_qiime_config.py -t

Example 3:

Print basic QIIME configuration details and test the full QIIME installation:

print_qiime_config.py -tf