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This script checks for the existence of expected files in parallel runs, and is useful for checking the status of a parallel run or for finding out what poller.py is waiting on in a possibly failed run.
Usage: identify_missing_files.py [options]
This script does not create any output files.
Check for the existence of files listed in expected_out_files.txt from a PyNAST alignment run, and print a warning for any that are missing.
identify_missing_files.py -e ALIGN_BQ7_/expected_out_files.txt